10:00-10:15 | 今日の作業確認 |
10:15-18:00 | ツールの開発 |
17:30-18:00 | 今日のまとめ (Skype 参加可) |
18:00-20:30 | 有識者会議 |
$ vi ~/galaxy/lib/galaxy/jobs/runners/__init__.py#L329
#compute_working_directory = job_wrapper.tool_working_directory
compute_working_directory = job_wrapper.working_directory
[galaxy@localhost trinityrnaseq]$ sudo docker images
REPOSITORY TAG IMAGE ID CREATED VIRTUAL SIZE
VM上の ubuntuの仮想マシンのroot の password を変更して思い出せなくなり、パスワードをリセット リセット方法は下記を参照
http://askubuntu.com/questions/24006/how-do-i-reset-a-lost-administrative-password
ヘッダーの記述をGalaxy => Pitagora-Galaxyに変更
> cd /home/galaxy/galaxy/static/scripts/layout
> cp masthead.js masthead.js.bak
> cat masthead.js.bak | sed -e 's/navbarBrandTitle.html("Galaxy
“/navbarBrandTitle.html(
”Pitagora-Galaxy "/' > masthead.js
> cd /home/galaxy/galaxy/static/scripts/bundled
> mv libs.bundled.js libs.bundled.js.bak
> cat libs.bundled.js.bak | sed -e 's/navbarBrandTitle.html("Galaxy
“/navbarBrandTitle.html(
”Pitagora-Galaxy "/' > libs.bundled.js
> cd /home/galaxy/galaxy/static/images
> mv galaxyIcon_noText.png galaxyIcon_noText.png.bak
> wget
http://download.pitagora-galaxy.org/data/resource/galaxyIcon_noText.png
不明
Favicon
> cd /home/galaxy/galaxy/static
> mv favicon.ico favicon.ico.bak
> wget
http://download.pitagora-galaxy.org/data/resource/favicon.ico
>sudo systemctl enable apache2
apache2.service is not a native service, redirecting to systemd-sysv-install
Executing /lib/systemd/systemd-sysv-install enable apache2
insserv: warning: script 'K01galaxy' missing LSB tags and overrides
insserv: warning: script 'galaxy' missing LSB tags and overrides
insserv: warning: script 'K01galaxy' missing LSB tags and overrides
insserv: warning: script 'galaxy' missing LSB tags and overrides
> lsb_release -a
No LSB modules are available.
Distributor ID: Ubuntu
Description: Ubuntu 16.04.1 LTS
Release: 16.04
Codename: xenial
VarDictJavaのためのインターフェイス設定
Genotype Imputation ワークフロー作成