pitagora-network.github.io

Galaxy Community Japan: Documentation Archive

Tools and Workflows

• ToolsAndWorkflows/Workflow_ChIP-seq_03
• ToolsAndWorkflows/Workflows
• ToolsAndWorkflows/Workflow_Bridger
• ToolsAndWorkflows/Workflow_RNA-seq_01
• ToolsAndWorkflows/Workflow_MeGAP_pre
• ToolsAndWorkflows/Workflow_ChIP-seq_02
• ToolsAndWorkflows/Tool_cuffmerge
• ToolsAndWorkflows/Tool_bowtie2
• ToolsAndWorkflows/Tool_cufflinks
• ToolsAndWorkflows/Tool_fastqc
• ToolsAndWorkflows/Tool_tophat
• ToolsAndWorkflows/Workflow_Variant_Calling_01
• ToolsAndWorkflows/Workflow_Qiime
• ToolsAndWorkflows/Workflow_MeGAP
• ToolsAndWorkflows/Workflow_CAGE_01
• ToolsAndWorkflows/Workflow_MiGAP
• ToolsAndWorkflows/Workflow_Bam_to_BigWig_01
• ToolsAndWorkflows/Workflow_Variant_Calling_02
• ToolsAndWorkflows/VirAmp_Workflows
• ToolsAndWorkflows/Workflow_BS-seq_01
• ToolsAndWorkflows/Tool_macs
• ToolsAndWorkflows/Workflow_Variant_Calling_03
• ToolsAndWorkflows/Tool_cuffdiff
• ToolsAndWorkflows/Workflow_Sample
• ToolsAndWorkflows/Orione-live-supplement
• ToolsAndWorkflows/Workflow_ChIP-seq_05
• ToolsAndWorkflows/Workflow_RNA-seq_02
• ToolsAndWorkflows/Workflow_VM_DNApod
• ToolsAndWorkflows/Workflow_ChIP-seq_01
• ToolsAndWorkflows/Orione_Workflows
• ToolsAndWorkflows/Workflow_ChIP-seq_04
• ToolsAndWorkflows/Tools
• ToolsAndWorkflows/Workflow_RNA-seq_03

Admin

• Admin/Admin_RNA-seq_04
• Admin/Admin_RNA-seq_05
• Admin/Admin_Variant_Calling_01
• Admin/Admin
• Admin/ツールのバージョン管理
• Admin/その他
• Admin/AMI公開手順
• Admin/ツールのインストール
• Admin/テスト手順
• Admin/ツールの開発
• Admin/Wikiの作成手順
• Admin/ツールインストール手順
• Admin/ツールのコンテナ化
• Admin/Admin_RNA-seq_02
• Admin/Admin_Variant_Calling_02
• Admin/データ移行手順
• Admin/Admin_RNA-seq_03
• Admin/Admin_Variant_Calling_03
• Admin/リファレンスの追加手順
• Admin/テストサイト設定手順
• Admin/VM配布準備手順

Pitagora Galaxy: Get Started

• GetStarted/Galaxyの高度な設定
• GetStarted/Galaxyのインストール
• GetStarted/Get_Started

Notes

• Notes/DDBJ_Galaxy
• Notes/Kagaraxy_log
• Notes/KotMemo
• Notes/Takakoron_note
• Notes/Book_Implementing_Reproducible_Research
• Notes/BWA
• Notes/Benchmark
• Notes/Huttenhower_Lab_Workflows
• Notes/Cloud
• Notes/Apache_Zeppelin
• Notes/Qiime_ツールのインストール方法
• Notes/DBCLS_Galaxy

Virtual Appliance

• VirtualAppliance/構築手順_0.2.x
• VirtualAppliance/構築手順_0.3.x
• VirtualAppliance/構築手順_0.4.x
• VirtualAppliance/Versions
• VirtualAppliance/構築手順_0.1.x

Events

• Events/BMB2015
• Events/GWT2016_Plan
• Events/RCAST_Map
• Events/Conference
• Events/Hands-on
• Events/BioHackathon_2017
• Events/BH17.11
• Events/Presentations
• Events/Events